Gene putatively regulated by attenuation in C_perfringens

                                                                        Characteristics of the secondary structures
Terminator:    Distance from promoter:31 nt.    Distance to gene:158 nt.     Distance to run of Ts=0 nt.   Size=35 nt.     Delta G=-24.90 kcal/mol

                                                                        Nomenclature/Definitions
The most likely promoter is: ttgaca-tatatt. It has a score value of 80.99 and is shown in blue

ttgacaagtttttttaaaaagagtatattaaaaataacacgatgtggtgtttagagagcaaagaagctccataggaaatccctatggagcttcttatttt
tttataagtatatttttggaaatagccaatttttatttataattaaaaattcaccttaattatattaaacaagaaagatcaacaaaaaaactacccgtaa
actaaaaatatacttataaataagctcttacccataattaataaaaagaggggagctaaaaATG

    CPE0892


Gene: CPE0892     GI: 18309874     BI number: CPE0892     GOG: COG1454     Description: NADPH-dependent butanol dehydrogenas


           a
         a  t
         a  c
          gc
          gc
          at
          ta
          at
          cg
          cg
          ta
          cg
          gc
          at
          at
          gc
          at
          at
            atttttttataagtatatttttggaaatagccaatttttatttataattaaaaattcaccttaattatattaaacaagaaagatcaacaaaaaaactacccgtaaactaaaaatatacttataaataagctcttacccataattaataaaaagaggggagctaaaaATG
                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[C] COG1454 Alcohol dehydrogenase, class IV ... can be seen here

    ..................................................................................................................