Gene putatively regulated by attenuation in C_perfringens

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:204 nt.     Distance to run of Ts=2 nt.   Size=32 nt.     Delta G=-16.10 kcal/mol

                                                                        Nomenclature/Definitions

cttcatactgtttgtagcttttattattaactttttataagcctcttatttttttgccctattttagattaagcactaaaatagggctatttctttaatt
aaattttataaagttaggaatacataaataaaaagtaaattatttaaaataggcacatttaagtatttacatatatggtaaataaagtataattattata
aagagagcttgaattttatgacttttaatgaagagatttagtaataaatgaagatttatagtatataaactcatattaggtagtggggtaggaggaagtt
ATG

    CPE1251 --- CPE1250


Gene: CPE1251     GI: 18310233     BI number: CPE1251     GOG: COG1196     Description: hypothetical protein
Gene: CPE1250     GI: 18310232     BI number: CPE1250     GOG: COG0419     Description: hypothetical protei


          aa
         t  g
         t  c
         a  a
          gc
          at
          ta
          ta
          ta
          ta
          at
          ta
          cg
          cg
          cg
          gc
            tatttctttaattaaattttataaagttaggaatacataaataaaaagtaaattatttaaaataggcacatttaagtatttacatatatggtaaataaagtataattattataaagagagcttgaattttatgacttttaatgaagagatttagtaataaatgaagatttatagtatataaactcatattaggtagtggggtaggaggaagttATG
                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[D] COG1196 Chromosome segregation ATPases ... can be seen here
[L] COG0419 ATPase involved in DNA repair ... can be seen here

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