                                                                        Gene putatively regulated by attenuation in C_tetani_E88

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:159 nt.     Distance to run of Ts=0 nt.   Size=24 nt.     Delta G=-16.00 kcal/mol

                                                                        Nomenclature/Definitions

CTACATGAAATGCAAAGAAGAGATTCTAAAAAAGGTTTAGCTACTCTTTGCATAGGTG
GAGGAATGGGAACAGCTCTTCTTGTAGAAAGATAAtaaaatcaaatataaattaagccgttaggaatattccta
acggcttttgtgttacaaaataaaagttgtaaaaaaactctcattttgtaacactttttttatatagtttatatattaataatatatttatgaatacaaa
ctatatatttgtcaataattattaaggatgtttttataataaattgtaagggggatatatagtttagtATG

    CTC00313 --- CTC00314 --- CTC00315 Gene: CTC00313     GI: 28210074     BI number: CTC00313     GOG: NOG45292     Description: hypothetical protein Gene: CTC00314     GI: 28210075     BI number: CTC00314     GOG: COG0766     Description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase Gene: CTC00315     GI: 28210076     BI number: CTC00315     GOG: COG2385     Description: stage II sporulation protein           ta          a  t           at           gc           gc           at           ta           ta           gc           cg           cg           gc             ttttgtgttacaaaataaaagttgtaaaaaaactctcattttgtaacactttttttatatagtttatatattaataatatatttatgaatacaaactatatatttgtcaataattattaaggatgtttttataataaattgtaagggggatatatagtttagtATG                                                                         Orthologous genes that have a predicted attenuator, grouped in COG families [M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase ... can be seen here [D] COG2385 Sporulation protein and related proteins ... can be seen here     ..................................................................................................................