Gene putatively regulated by attenuation in C_diphtheriae
Characteristics of the secondary structures
Terminator: Distance to gene:86 nt. Distance to run of Ts=0 nt. Size=21 nt. Delta G= -9.80 kcal/mol
Antiterminator: Size=22 nt. Delta G= -6.70 kcal/mol
Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case
GCGGTGGTCAAAGCCTTGTCCATATCATTACGCTTGAGCGCGGTGATCGTGATGCCCA
ACTTCTGGGCTACCACAGGGCGTGGGTGTGGACCATTACGGCGTAGATCTTGCAGCCA
CTGGGGTGGATTAGCTTGTAGTTCCACGAACTCGTCGTGAGTTAAAGCGTTGTTCTGG
AACTCCTCTGGCGTGGCGGGCAGGAAGATGCCCAGCTTCTTTGCAGCGGTCTGCGGCT
TCATtgcggtgccggacggctttcttacagattcttcattcacagggttaacggtagcattgattcttATG

DIP0934
Gene: DIP0934 GI: 38233530 BI number: DIP0934 GOG: ------- Description: Conserved hypothetical protei
T
G G AA
CG G G
GC G A
G G AT
TG CG
CG GC
| C GC
TA GC
CG | A
CG CG
TA GC
TTCTTTGCAGCGGTCTGCGGCTTCATtgcggtgccggacggctttcttacagattcttcattcacagggttaacggtagcattgattcttATG
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