                                                                        Gene putatively regulated by attenuation in C_diphtheriae

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:162 nt.     Distance to run of Ts=2 nt.   Size=15 nt.     Delta G= -6.20 kcal/mol
Antiterminator: Size=40 nt.     Delta G= -8.10 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

CTAGTTCGCCGGAAACTGCGATAACAGGAATATGCGTTGAAAGGAGCGTATCAAGGCC
TGCCTCCCAAGCCCGTTTTCCACCTAGTAGACGAACGACAAAGATGTCGGTTGTGGCG
ATGAGCTCGCCTAGTTTTTCTTCATTCACATAGTTGGGATTGAAGTACTGGAATTCTA
CTTCTGATTGTGTTGTTGCTGCTTTGGCCGATAGCAAATCGGTATCGGAGGTGGAGAG
CAATGTGATCATcgtaaaacgtcaattcctttcgtgggaggcgcgcccagcgcaggcgtaaaagttgcATG

    DIP1230 Gene: DIP1230     GI: 38233818     BI number: DIP1230     GOG: -------     Description: Hypothetical protei AG A  A AT CG AT GC CG A  G AT GT CG AT G  G A  | TG         A GC       G  G |  G      T  C |  A       AT |  T       GC A  G       CG TA        GC CG        GC             TAGTTTTTCTTCATTCACATAGTTGGGATTGAAGTACTGGAATTCTACTTCTGATTGTGTTGTTGCTGCTTTGGCCGATAGCAAATCGGTATCGGAGGTGGAGAGCAATGTGATCATcgtaaaacgtcaattcctttcgtgggaggcgcgcccagcgcaggcgtaaaagttgcATG     ..................................................................................................................