Gene putatively regulated by attenuation in C_diphtheriae

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:208 nt.     Distance to run of Ts=0 nt.   Size=22 nt.     Delta G= -8.10 kcal/mol
Antiterminator: Size=41 nt.     Delta G= -6.94 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

CTCCTGCGCGTAGCGAACAATATCTTTTGCCTTATTACGCTGTAGCCGACCAATAGCA
CACCAATAGGCGTTGGGGATCGCCTGCGCTTTTTCTACCAGCTCTTGGGGCCTATTTT
CGCCAAACACCGTCACTCCCGCGTCCATGGCTTCCTGAACTGCCGCAACCGGATGGTT
TTTACTCACTGCGATGAGGCGAATATCGCTGGGCTTACGCCCAGAACGCTGAGCTGCT
GCGGCGATTTTTTCAGAAACGATCTGGTAGCGGGTGCGAAAATCGGACATGAATCCTA
CGATACACATATG

    DIP1744


Gene: DIP1744     GI: 38234315     BI number: DIP1744     GOG: -------     Description: Putative prolyl aminopeptidas


  G
C  A
C  C
G  C
A  A
 TA
 GT
 TA
 CG
 GC
|  A
|  C       AT
C  A      G  C
A  C      G  G
T  C       GC
T  A       GC
A  A      T  T
T  T       TG
 TA        GC
 CG        CG
 CG        GC
 GC        GT
            TTTTCTACCAGCTCTTGGGGCCTATTTTCGCCAAACACCGTCACTCCCGCGTCCATGGCTTCCTGAACTGCCGCAACCGGATGGTTTTTACTCACTGCGATGAGGCGAATATCGCTGGGCTTACGCCCAGAACGCTGAGCTGCTGCGGCGATTTTTTCAGAAACGATCTGGTAGCGGGTGCGAAAATCGGACATGAATCCTACGATACACATATG
    ..................................................................................................................