Gene putatively regulated by attenuation in C_glutamicum

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:38 nt.     Distance to run of Ts=0 nt.   Size=28 nt.     Delta G= -8.90 kcal/mol
Antiterminator: Size=41 nt.     Delta G= -7.50 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

CCCATGTCATCTTGATCGGAATGGGCCGTGACCTCATTCCTTTGCAATACACCATGCA
AGGTTTAGGCGAGGCCGAGCGTAACGACGCCCAACAGCGCGAACGCTCCTTGCTCTAC
GTTGCAGCTTCTCGTGCACGTGATGCCCTTGTTCTCACCACGCATACTGAGCCTTCGG
AGTTGCTGCCGCGGGTTTAGagcaccaagtaactaaagttcgaaagtatttccgaacggtgtcggcctctgcgcatacactgtat
ttttaaagaaaattcttctcaattctaagggtgaatatccaATG

    NCgl0703


Gene: NCgl0703     GI: 19551963     BI number: NCgl0703     GOG: COG1479     Description: hypothetical protei


 ta
g  t
a  t
a  t
a  c
 gc
 cg
 ta
 ta
 gc
a  |
a  |
a  |       ct
t  |      t  g
c  |      c  c
a  |       cg
a  |       gc
t  |      g  a
g  |      c  t
a  |       ta
a  |       gc
 cg        ta
 cg        gc
 at        gt
 cg        cg
 gt        at
            atttttaaagaaaattcttctcaattctaagggtgaatatccaATG


                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[S] COG1479 Uncharacterized conserved protein ... can be seen here

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