Gene putatively regulated by attenuation in C_glutamicum
Characteristics of the secondary structures
Terminator: Distance to gene:35 nt. Distance to run of Ts=0 nt. Size=16 nt. Delta G= -7.10 kcal/mol
Antiterminator: Size=46 nt. Delta G= -7.60 kcal/mol
Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case
AGCAATCGCCGCAAAGGGTGAAGGCTTCTGGACCACTCAGTTCCCACAAATCGGTGAT
TGGAACGAAGATCAGGCAGCAGCACTTGCCGACCGCGCACAAACCTGTGGCCTAGTTA
AGGCTGACACCTACCTTTCTGAGCTGTCCTCCAACTTCTCTTCCTAAaaggttcgggggtaaccc
caaaaatcacttaagtcacaacagtcacataaatcacttcagtaacgtatgattttggactgttgtggcttttgccatatttatttcatttccatctcag
tgatctcttaaggaaacccATG

NCgl0932
Gene: NCgl0932 GI: 19552196 BI number: NCgl0932 GOG: NOG24982 Description: hypothetical protei
ac
a g
t t
g a
at
cg
ta
| t
| t
t t
c t
a g
cg
ta
a c
a t
a g tt
t t t t
at cg
cg gc
at gc
cg ta
tg gt
gc ta
tttatttcatttccatctcagtgatctcttaaggaaacccATG
..................................................................................................................