                                                                        Gene putatively regulated by attenuation in C_burnetii

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:69 nt.     Distance to run of Ts=0 nt.   Size=24 nt.     Delta G= -8.00 kcal/mol
Antiterminator: Size=38 nt.     Delta G= -7.50 kcal/mol
Anti-antiterminator:   Size=52 nt.     Delta G= -6.60 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
Bases shared by the anti-antitermination and antitermination structures are shown in green
The sequences of the anti-antiterminator, antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

TGCAGGTTATGAAGTGTTATGGGATGATCGTAAAGAACGGCCGGGCGTTATGTTTGCT
GATATGGATTTAATTGGTATTCCTCATCGACTGGTGATCAGCGAGTCGGGTTTAGATC
GTGGTATTGTTGAATATAAAGCACGTAAAAGTAAGGAAGCCGAAAACGTATCCCTTGA
AAATGTCCTTTCTGTGTTTAGATGAAGAAATCTCGGACATCAACGGCCGAGATTTCTT
TCATACTGAGGCGTTCAATAGTATTAATACGTACTCGAATTATCACTGCCCGATCGGC
TATCGCTTCTTTG

    CBU0083 Gene: CBU0083     GI: 29653444     BI number: CBU0083     GOG: -------     Description: hypothetical protei AA A  A GC CG C  T G  A A  T       TA A  C      T  G GC       T  A GC       G  T AT       T  G AT       G  A TG        TA G  A       CG A  A       TA A  A       TA        CA A  |       TA       T  A A  |      |  T      A  C TA       |  C      C  G GT       |  T      A  G CG       |  C       GC AT        CG        GC C  C       CG        CG GC        TA        TA AT        GC        CG AT        TA        TA AT        AT        AT                         TTCTTTCATACTGAGGCGTTCAATAGTATTAATACGTACTCGAATTATCACTGCCCGATCGGCTATCGCTTCTTTG     ..................................................................................................................