                                                                        Gene putatively regulated by attenuation in D_radiodurans_2

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:54 nt.     Distance to run of Ts=0 nt.   Size=30 nt.     Delta G=-20.90 kcal/mol
Antiterminator: Size=44 nt.     Delta G= -9.40 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

CACCGTGGGAGAGGACGCGGCTGGGATTCTCTTCTACAGGAGGTACAGGGTTTGCGTG
AATCCGAACTGCGAACGCTACCGCCAGCGCCGCACGTCGCTGGAAGCGTATCTGCCAG
AGGACGGCCCGCCGATCACGGTGGAGAGAGCACAACTGAATCCGTACCTTCCGCCCGA
AAAAAGTTCCCATCCATCTCTGTTCGACGAGTTCTAGGACTGGAGGAGCCCCCACaggc
ttctccagttgttttggctgacccgcccgcctgtcgcccggtccgtgtcaactggccggtcctgctgATG

    DRA0089 Gene: DRA0089     GI: 15807757     BI number: DRA0089     GOG: -------     Description: hypothetical protei   G A  T G  T C  C A  T G  A CG TG TA GC T  | C  |       CA T  |      C  C C  |      C  a T  |       Cg AT        Cg CG        Gc CG        At TA        Gt A  |       Gc C  |       At CG        Gc CG        Gc TA        Ta TG        Cg GC        At             tgttttggctgacccgcccgcctgtcgcccggtccgtgtcaactggccggtcctgctgATG     ..................................................................................................................