Gene putatively regulated by attenuation in D_radiodurans_2
Characteristics of the secondary structures
Terminator: Distance to gene:39 nt. Distance to run of Ts=0 nt. Size=19 nt. Delta G= -8.80 kcal/mol
Antiterminator: Size=32 nt. Delta G= -9.40 kcal/mol
Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case
AGGCGCGCGGGTCGAGGTCGAGCTGGTGGCTCTCTCCGTTGACTGTGAGTTGCACCGG
GATATTCATGTGGACCTTCCTCAAAGAGATTGAACCGACACCGACATCGGATTGGCGC
AAGCATAAACGCGCCTTCCCATCCCGAAACATgagtcgtgtccgcgtcagggacgtcatttaagggaaaatgaagg
atgttgtctatctttccggtggggccgacctttgcagtgcggggcacgctcaagtcgcttgggcgttttctcacgtctgcgccgctgccgcctgcgtagg
gtgagtccATG

DRA0234
Gene: DRA0234 GI: 15807898 BI number: DRA0234 GOG: ------- Description: hypothetical protei
g
g g
cg
gc
ta
gc
a |
cg c
gc t g
t t gc
t c at
t a at
c a cg
cg tg
at cg
gc gc
cg cg
ttttctcacgtctgcgccgctgccgcctgcgtagggtgagtccATG
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