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A small repository of synaptic protein information

Protocols

Caution! In converting these protocols to HTML, some units have been scrambled.
Specifically, microliters (ul) often appear as milliliters (ml). Think first!


PLASMID PREP
(Bill Trimble)


1. Pellet 500 ml ON culture (4 krpm, 10' @ 4oC).
2. Wash 1X in TE.
3. Resuspend in 8ml Lysis Buffer and transfer to 50ml cfg. tube.
4. Add 5ml 0.5M EDTA + 1.5ml 5mg/ml lysozyme, mix gently.
5. Incubate 15' on ice.
6. Add 15ml Triton Mix and mix gently.
7. Incubate 15' on ice.
8. Spin 18 krpm, 45' @ 4oC.
9. Carefully pour the supernatant into a 50ml tube. Add CsCl2 @ 100% w/v.
10. Add 3ml 10mg/ml EtBr.
11. Centrifuge 40 krpm, 20h @ 20oC. (VTi50 rotor).
12. Harvest the plasmid DNA with a 16 or 18G needle. Remove the EtBr by extracting with salt-saturated isopropanol or butanol. Dilute the prep with 3-4 vol. TE and precipitate with 2 vol. EtOH.

TE
10mM Tris-HCl, pH 8.0
1mM EDTA

Lysis Buffer
50mM Tris-HCl, pH 8.0
10% Sucrose

0.5M EDTA

5mg/ml Lysozyme
(freshly prepared in lysis buffer)

Triton Mix
50mM Tris-HCl, pH 8.0
62.5mM EDTA
0.1% Triton X-100

Cesium Chloride

10mg/ml Ethidium Bromide

CsCl2-saturated Isopropanol or Butanol
acc 2/90

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