Stanford MicroArray Forum

"analysis software"

Email this topic to a friend
Printer-friendly version of this topic
 
Previous Topic | Next Topic 
Mguide Home Forum Home Data Analysis (Protected)
Original message

kmmuller Click to EMail kmmullerClick to view user profileClick to check IP address of the poster Jul-24-02, 08:32 AM (PDT)
"analysis software"
Hi everyone. We are looking into purchasing software to analysis our microarray data (our model organism is Arabidopsis). Any comments, concerns or information about software packages or programs would be helpful.
Thanks
  Alert Edit | Reply | Reply With Quote | Top

 Table of contents

RE: analysis software, sanjay, Oct-07-02, (1)
RE: analysis software, volker, Oct-23-02, (2)
RE: analysis software, sanbunty, Jan-12-04, (3)

Lobby | Topics | Previous Topic | Next Topic
Messages in this topic

sanjay Click to EMail sanjayClick to view user profileClick to check IP address of the poster Oct-07-02, 04:23 AM (PDT)
1. "RE: analysis software"
According to my opinion ,J Express would serve your purpose .for details you can contact www.molmine.com
  Remove | Alert Edit | Reply | Reply With Quote | Top

volker Click to EMail volkerClick to view user profileClick to check IP address of the poster Oct-23-02, 01:36 AM (PDT)
2. "RE: analysis software"
Hi,
J-Express is not free any more. And I'm not sure, if they are willing to grant you a demo-version. The last free version we have has some significant disadvantages, e.g. it was not possible any longer to do uncentered clustering as in the version(s) before. I was very unhappy about this. There were also some minor coding problems with loading previously saved datasets. Maybe they solved this by now, but we are not able to buy the new product bacause of the cost.
At the moment we're using EPCLUST most of the time. It's free (at the time being), it's web-based, it's fast, but it's Version 0.9.23 beta and sometimes it's offline. Look for yourself to see, if this is what you need.
http://ep.ebi.ac.uk/EP/EPCLUST/

bye,
Volker

  Remove | Alert Edit | Reply | Reply With Quote | Top

sanbunty Click to EMail sanbuntyClick to check IP address of the poster Jan-12-04, 09:31 PM (PDT)
3. "RE: analysis software"
Hi,

There are so many MicroArray data analysis software in the market
but i am using one very good software called "SilicoCyte".

If you are still in a hunt for software go to the www.silicoyte.com and i am still open for any enquiery regarding analysis.

bye

  Remove | Alert Edit | Reply | Reply With Quote | Top


Lock | Archive | Remove

Lobby | Topics | Previous Topic | Next Topic
Powered by DCF2000 ©1997-2000 by DCScripts. All rights reserved.